Magazine article from our research archive:
|
|
Genome-Wide Analysis of Transposon Insertion Polymorphisms Reveals Intraspecific Variation in Cultivated Rice1[W][OA]
- Article from:
-
Plant Physiology
- Article date:
-
September 1, 2008
- Author:
-
;
;
;
;
|
Copyright informationCopyright American Society of Plant Biologists Sep 2008. Provided by ProQuest LLC. (Hide copyright information)
|
Insertions and precise eliminations of transposable elements generated numerous transposon insertion polymorphisms (TIPs) in rice (Oryza sativa).We observed that TIPs represent more than 50% of large insertions and deletions (.100 bp) in the rice genome. Using a comparative genomic approach, we identified 2,041 TIPs between the genomes of two cultivars, japonica Nipponbare and indica 93-11.We also identified 691 TIPs between Nipponbare and indica Guangluai 4 in the 23-Mb collinear regions of chromosome 4.Amongthem, retrotransposon-based insertion polymorphisms were used to reveal the evolutionary relationships of these three cultivars. Our conservative estimates suggest that the TIPs ...
Related newspaper, magazine, and journal articles:
|
SCIENTISTS COMPLETE ADVANCED DRAFT SEQUENCE OF RICE GENOME
Regulatory Intelligence Data;
December 18, 2002 ;
409 words
......advanced draft, or blueprint, of the rice genome. This milestone concludes the second...under the coordination of the Japanese Rice Genome Program to improve the quality and increase...ceremony was held in Japan. Decoding the rice genome is an important scientific achievement...
|
|
Leading Article: The rice genome must be made available to all
The Independent - London;
April 5, 2002 ;
380 words
......increasingly hungry world. Deciphering the rice genome - the genetic recipe of the plant and...Science, goes as far as to say that the rice genome will prove to be even more important...Preliminary estimates of the size of the rice genome range between 45,000 and 56,000 genes...
|
|
Scientists Complete Advanced Draft Sequence of Rice Genome.
PR Newswire;
December 18, 2002 ;
439 words
......advanced draft, or blueprint, of the rice genome. This milestone concludes the second...under the coordination of the Japanese Rice Genome Program to improve the quality and increase...ceremony was held in Japan. Decoding the rice genome is an important scientific achievement...
|
|
USDA: $12.3 million in grants awarded to decode rice genome.
M2 Presswire;
October 6, 1999 ;
437 words
......million in grants awarded to decode rice genome (C)1994-99 M2 COMMUNICATIONS LTD RDATE...for sequencing by the International Rice Genome Working Group. Martha Krebs, director...Energy's Office of Science said, The rice genome sequencing project is an important step...
|
|
Rice team finish decoding genome
China Daily;
December 19, 2002 ;
317 words
......international consortium set up to decode the rice genome announced the completion of its task...decoding of about 430 million bases of the rice genome, which holds the key to cultivating...major cereal crop to be sequenced, the rice genome will also provide data to be used to...
|
|
$12.3 MILLION IN GRANTS AWARDED TO DECODE RICE GENOME
Regulatory Intelligence Data;
October 5, 1999 ;
389 words
......for sequencing by the International Rice Genome Working Group. Martha Krebs, director...Energy's Office of Science said, The rice genome sequencing project is an important step...international effort to sequence the entire rice genome, said National Science Foundation Assistant...
|
|
Hot cereal: rice reveals bumper crop of genes. (This Week).(rice genome...
Science News;
April 6, 2002 ;
700+ words
......environment than current strains are. The rice genome may also provide a boost to the investigation...cereal crops, such as corn and wheat. The rice genome will have a global impact on human health...larger than that of A. thaliana, the rice genome is much smaller than those of ...
|
|
Syngenta to Release Its Rice Genome Map.
PR Newswire;
March 29, 2002 ;
670 words
......Institute (TMRI) will release its rice genome map when it publishes its first major analysis of the rice genome. The completion of the sequence provides...work of various public and private rice genome efforts around the world. The initiative...
|
|
Scientists Sketch Working Draft of Rice Genome
Xinhua News Agency;
October 12, 2001 ;
351 words
......completed the sequencing of the hybrid rice genome, whose full database willbe published...and related analysis on itsown. The rice genome has about 430 million base pairs, one...project,said that the unraveling of the rice genome will be conducive to studying other...
|
|
Rice Genome Sequencing Provides Another Tool for Feeding Burgeoning Global...
Ascribe Higher Education News Service;
April 4, 2002 ;
589 words
......AScribe Newswire) -- Sequencing of the rice genome not only opens up a vast reservoir of...Completion of the sequencing of the rice genome will be announced in the April 5 issue...efficient ways to tap into the wealth of rice genome sequence information to address production...
|
|
GENOMICS ONE LAUNCHES A 15X RICE GENOME LIBRARY SELECTED USING THE...
PR Newswire;
September 19, 2000 ;
364 words
......TrueBlue-BAC2(r) vector. Genomics One's rice genome library consists of over 49,000 clones...cover the estimated 430-million base pair rice genome over 15 times (15X). Unlike the other rice genome libraries constructed to date, Genomics...
|
|
Sequencing the rice genome
Plant Cell;
November 1, 2000 ;
700+ words
......genome sequencing of a cereal crop. The rice genome is well mapped and well characterized...genome is ~37 times the size of the rice genome at close to 16,000 Mb (Arumuganathan...task for whole genome sequencing. The rice genome is 3.5 times the size of the Arabidopsis...
|
|
Monsanto and Researchers Celebrate First Anniversary of Sharing Rice...
PR Newswire;
August 1, 2001 ;
700+ words
......Monsanto Company (NYSE: MON) made its draft rice genome sequence data available to the worldwide...data and research materials from its rice genome sequencing project to the International Rice Genome Sequencing Project (IRGSP), a multi-country...
|
|
Company pins down rice genome, expects finding to speed breeding of...
Knight Ridder/Tribune News Service;
January 26, 2001 ;
568 words
......its researchers had mapped the entire rice genome, a breakthrough the company said could...of Salt Lake City, to complete the rice genome map. The map includes the chemical sequences...for any other genome, Briggs said. The rice genome is second in size only to the human...
|
See all results.
Or, try our
Advanced Search.
|